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What Medication Should You Not Take With a Probiotic?

4 min read

Recent data shows that about 1 in 20 U.S. adults and children use nonfood probiotics, often for digestive health [1.7.1]. As their use grows, it's crucial to understand a key question: what medication should you not take with a probiotic?

Quick Summary

While generally safe, probiotics can interact with certain drugs. Taking probiotics with antibiotics or antifungals requires specific timing, while those on immunosuppressants should consult a doctor due to potential risks.

Key Points

  • Antibiotics: Can kill bacteria-based probiotics; take them at least 2-3 hours apart to maintain probiotic effectiveness [1.3.1].

  • Antifungals: Will destroy yeast-based probiotics like Saccharomyces boulardii; doses should be separated by several hours [1.2.1, 1.8.3].

  • Immunosuppressants: Pose a serious risk, as probiotics could cause infections in those with weakened immune systems. Medical consultation is essential [1.6.2, 1.6.3].

  • Timing is Crucial: Spacing probiotics and antimicrobial medications is the key strategy to prevent the supplement from being rendered ineffective [1.2.3].

  • Consult a Professional: Always talk to a doctor before taking probiotics, especially if you are on any prescription medication or have a chronic condition [1.3.2].

  • Probiotic Type Matters: The specific interaction depends on whether the probiotic is bacteria-based or yeast-based and the type of medication being taken [1.8.3].

  • Not All Probiotics are Equal: Probiotic supplements are not highly regulated by the FDA, so choosing a reputable brand is important [1.6.6].

In This Article

Understanding Probiotics and Their Role

Probiotics are live microorganisms, often called "good" or "beneficial" bacteria, that can provide health benefits when consumed, most notably for digestive health [1.7.2]. They are found in supplements and fermented foods like yogurt and kefir. These beneficial microbes help maintain a healthy balance in your gut microbiome, which is the community of trillions of bacteria residing in your digestive tract. This balance can be disrupted by illness or medications, particularly antibiotics, which don't distinguish between harmful and beneficial bacteria [1.3.2]. While many people take probiotics to counteract these effects, it's vital to consider how they might interact with other medications.

The Primary Concern: Antibiotics

The most well-known interaction is between probiotics and antibiotics. Since antibiotics are designed to kill bacteria, taking them at the same time as a bacteria-based probiotic can render the probiotic ineffective [1.2.2, 1.3.3]. The antibiotic may simply kill the beneficial bacteria in the supplement before they have a chance to confer any benefit.

To avoid this, healthcare professionals generally recommend spacing the doses apart. The common advice is to take the probiotic at least 2 to 3 hours before or after your antibiotic dose [1.3.1, 1.2.1]. This time gap allows the probiotic bacteria to pass through the stomach and begin to colonize the gut before the next antibiotic dose is introduced. It is often recommended to start taking probiotics on the same day as the antibiotic course begins and continue for several weeks after the course is finished to help restore the gut microbiome [1.3.2, 1.4.4].

Caution with Antifungal Medications

Just as antibiotics kill bacteria, antifungal medications are designed to kill fungi. This presents a conflict if you are taking a yeast-based probiotic, with the most common one being Saccharomyces boulardii [1.8.3]. Taking an antifungal drug—such as ketoconazole, clotrimazole, or nystatin—concurrently with a yeast-based probiotic will likely destroy the beneficial yeast, making the supplement useless [1.3.1, 1.8.2].

Similar to antibiotics, if you need to take both, it is crucial to separate the doses. Taking a probiotic yeast at a different time of day from the antifungal medication may mitigate this interaction, but you should always consult your healthcare provider for specific guidance [1.2.1]. For bacterial probiotics (like Lactobacillus or Bifidobacterium), this interaction is not a concern as they are not affected by antifungal drugs.

High-Risk Groups: Immunosuppressants

For individuals with weakened immune systems, taking probiotics requires significant caution. This group includes people on immunosuppressant medications (like corticosteroids such as prednisone), those undergoing chemotherapy, organ transplant recipients, or individuals with conditions like HIV/AIDS [1.6.1, 1.3.4].

In these cases, the primary concern is not a lack of efficacy, but a risk of infection. Probiotics contain live microorganisms, and in a person with a compromised immune system, these organisms could potentially grow uncontrollably and cause serious infections, such as bacteremia (bacteria in the blood) or fungemia (fungi in the blood) [1.6.3, 1.9.2]. Although rare, there have been case reports of probiotics leading to infections in immunocompromised patients [1.6.2]. Because of this risk, individuals taking immunosuppressant medication should always speak to their doctor before starting any probiotic supplement [1.2.1, 1.3.2].

Medication Interaction Comparison Table

Medication Class Type of Probiotic Affected Nature of Interaction Recommendation
Antibiotics Bacterial Probiotics (e.g., Lactobacillus, Bifidobacterium) Antibiotic can kill the probiotic bacteria, reducing its effectiveness [1.3.1]. Take probiotic at least 2-3 hours apart from the antibiotic dose [1.2.3, 1.3.2].
Antifungals Yeast-Based Probiotics (e.g., Saccharomyces boulardii) Antifungal can kill the probiotic yeast, rendering it ineffective [1.8.3, 1.2.1]. Take the probiotic yeast at a different time of day from the antifungal medication [1.2.1].
Immunosuppressants All Probiotics (Bacterial and Yeast) Increased risk of the probiotic organisms causing a systemic infection (bacteremia or fungemia) due to weakened immunity [1.6.4, 1.9.2]. Consult a healthcare provider before use. Probiotics are often not recommended for this group due to safety concerns [1.6.3].

Best Practices for Safe Probiotic Use

  1. Always Consult Your Doctor: Before starting any new supplement, including probiotics, discuss it with your healthcare provider. They can offer personalized advice based on your health status and current medications [1.3.1]. This is especially critical if you are pregnant, breastfeeding, or have a chronic health condition [1.3.2, 1.3.5].
  2. Timing is Key: For antibiotics and antifungals, proper timing is essential to ensure the probiotic's survival and effectiveness. A 2-3 hour window is the standard recommendation [1.2.5].
  3. Read the Label: Probiotic supplements are not all the same. They contain different strains and quantities of microorganisms. The product label may provide specific instructions for use with medications [1.2.5].
  4. Choose High-Quality Supplements: Since probiotics are regulated as dietary supplements, they are not subject to the same FDA oversight as prescription drugs [1.3.2, 1.6.6]. Choose products from reputable manufacturers.

Conclusion

While probiotics offer significant benefits for gut health, they are not without potential interactions. The answer to "what medication should you not take with a probiotic?" depends on the medication and the type of probiotic. For antibiotics and antifungals, the primary issue is reduced probiotic efficacy, which can be managed by separating the doses. However, for individuals on immunosuppressants, the risk of infection is a serious concern, and medical consultation is mandatory. By understanding these interactions and communicating openly with a healthcare professional, you can safely incorporate probiotics into your wellness routine without compromising your medical treatments.


For further reading from an authoritative source, consider the National Center for Complementary and Integrative Health (NCCIH) page on probiotics: https://www.nccih.nih.gov/health/probiotics-what-you-need-to-know

Frequently Asked Questions

No, you should not take them at the exact same time. Doing so can make the probiotic ineffective because the antibiotic will kill the beneficial bacteria. It is recommended to wait at least 2 to 3 hours between taking your antibiotic and your probiotic [1.3.1, 1.2.3].

If you take a yeast-based probiotic, like Saccharomyces boulardii, with an antifungal medication, the medication will likely kill the beneficial yeast in the probiotic, making the supplement ineffective [1.8.3, 1.2.1].

For people with weakened immune systems, such as those taking immunosuppressant drugs, the live microorganisms in probiotics could potentially cause a serious infection, like sepsis or fungemia. Their immune system may not be strong enough to control the probiotic organisms [1.6.3, 1.6.4].

Many experts recommend continuing to take probiotics for at least a few weeks after you have finished your course of antibiotics to help your gut microbiome recover and return to a normal state [1.3.2, 1.4.2].

Most bacteria-based probiotics (like Lactobacillus and Bifidobacterium strains) will be affected by broad-spectrum antibiotics. Yeast-based probiotics like S. boulardii are not affected by antibiotics, but they are affected by antifungal drugs [1.4.2, 1.8.3].

Yes, some sources suggest that probiotics work best when taken on an empty stomach, at least 2 hours apart from your antibiotic dose [1.3.2]. However, always follow the specific directions on your product's label [1.2.5].

The most significant and clearly defined interactions are with antibiotics, antifungals, and immunosuppressants [1.3.1, 1.2.1]. Probiotics have the potential to affect how the body absorbs and processes various drugs, but research is ongoing. Always consult your doctor about all supplements you take [1.2.6].

References

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Medical Disclaimer

This content is for informational purposes only and should not replace professional medical advice.